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Function to calcualte 5' and 3' alternative splice sites given a GRanges object

Source: R/calc_logic.R
calc_a3ss_a5ss.Rd

Function to calcualte 5' and 3' alternative splice sites given a GRanges object

Usage

calc_a3ss_a5ss(gr)

Arguments

gr

A GRanges object with metadata columns: 'exon_rank', 'gene_id', 'tx_id', and 'coef'.

Value

A GRanges object with an additional 'event' metadata column indicating retained introns.